A free software for processing SAM files #Process sam #Sam processor #Estimate gene expression #Process #Sam #Processor
SAMMate is a free and easy to use GUI software tool for processing SAM files. SAMMate allows users to accurately estimate gene expression scores using short reads to generate wiggle files for visualization in UCSC genome browser and an alignment statistics report.
SAMMate also fast calculates a whole-genome signal map at the base-wise resolution, which is the required input for solving an array of bioinformatics problems.
SAMMate exports a wiggle file for alignment visualization in UCSC genome browser, and an alignment statistics report.
SAMMate is compatible with both single-end and paired-end sequencing technologies.
System requirements
SAMMate 2.7.4
add to watchlist add to download basket send us an update REPORT- runs on:
- Mac OS X (PPC & Intel)
- file size:
- 25 MB
1 screenshot:
- main category:
- Utilities
- developer:
- visit homepage
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