Helps you determine genome-specific alignments #Determine alignment #Genome alignment #Genome determination #Determination #Genome #Alignment
ASAP is a tool created to determine genome specific alignments for high -throughput sequencing experiments.
ASAP successfully analyzes allelic differences in NGS data by aligning sequences to two reference genomes in parallel
ASAP is developed using the Perl programming language and can be run on Mac OS X and Linux.
System requirements
What's new in ASAP 0.1.2:
- Added an extra check for single-end and paired-end files which prevents error messages when a chromosome is not present in equivalent genomes (e.g. if one genome does not have MT as a chromosome).
- Fixed a counting bug for --dissimilar alignment mode where sequences aligning equally well to both genomes were counted for "multiple alignments to the same genome" instead of "aligning equally well to both dissimilar genomes". This should now work
- as intended in both single-end and paired-end mode.
- Removed the requirement of paired-end sequences to have identical sequence IDs.
ASAP 0.1.2
add to watchlist add to download basket send us an update REPORT- runs on:
- Mac OS X (-)
- file size:
- 414 KB
- filename:
- ASAP_v0.1.2.tar.gz
1 screenshot:
- main category:
- Math/Scientific
- developer:
- visit homepage
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