Phylogeny-aware progressive sequence alignment method #Probabilistic multiple alignment #DNA sequence #Amino-acid sequence #Probabilistic #Multiple alignment #DNA
PRANK is a probabilistic multiple alignment program for DNA, codon and amino-acid sequences. PRANK is based on a novel algorithm that treats insertions correctly and avoids over-estimation of the number of deletion events.
In addition to this, PRANK borrows ideas from maximum likelihood methods used in phylogenetics and correctly takes into account the evolutionary distances between sequences.
Lastly, PRANK allows for defining a potential structure for sequences to be aligned and then, simultaneously with the alignment, predicts the locations of structural units in the sequences.
PRANK is cross-platform and it works on Mac OS X, Windows and Linux. Binaries for the Windows and Linux platforms are available on the project's homepage.
Detailed instructions on how to install and use the PRANK utility on your Mac are available HERE.
What's new in PRANK 140110:
- Search order of external tools changed and bundled programs now preferred. Ancestor inference for translated alignments of DNA sequences. A fix for rare crashes due to overly long branch lengths.
PRANK 140110
add to watchlist add to download basket send us an update REPORT- runs on:
- Mac OS X 10.7 or later (-)
- file size:
- 7.5 MB
- main category:
- Math/Scientific
- developer:
- visit homepage
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- Windows Sandbox Launcher
- Context Menu Manager
- 4k Video Downloader
- ShareX
- 7-Zip
- IrfanView
- Microsoft Teams
- Zoom Client
- calibre
- Bitdefender Antivirus Free