Java tool to identify errors in pedigree/genotype datasets #Find error #Dataaset error #Genotype error #Find #Error #Genotype
ResSpecies GenotypeChecker is an easy to use tool for identifying likely data errors in pedigree/genotype datasets and to assist data cleansing.
Datapoint errors in pedigree genotype datasets are difficult to identify and adversely affect downstream genetic analyses. Errors that are inconsistent with the rules of Mendelian inheritance typically invalidate linkage analysis algorithms, and cause such analyses to fail. Genotype errors may arise from a variery of systematic or sporadic errors in either the genotyping assay, or in recording the pedigree or genotype information.
By applying an inheritance-checking algorithm for markers across the pedigree and visualising the inheritance data in an exploratory user interface, GenotypeChecker allows the sources of data inconsistency can be resolved.
System requirements
ResSpecies GenotypeChecker 1.005
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- Mac OS X (-)
- file size:
- 1 KB
- main category:
- Math/Scientific
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