Parallel stochastic ion channel simulator #Ion channel simulator #Neuron behavior computation #Ion channel gating #Ion #Channel #Simulator
PSICS is a free, open-source and cross-platform utility that is capable of calculating the behavior of neurons based on stochastic nature of ion channel gating.
PSICS will enable you to view ion channels as kinetic schemes with one or several serial gating complexes.
Moreover, PSICS can read an input model, calculate it and then write the output from the command line.
Being developed using Java, PSICS is a cross-platform utility which can be used on any operating system that comes with Java support (e.g. Mac OS X, Windows, Linux).
Detailed instructions on how to install and use the PSICS utility on your Mac are available HERE.
System requirements
What's new in PSICS 1.1.1:
- On some platforms, access to the runtime arguments (the name of the xml file to run) was giving erroneous strings padded with junk rather than blanks. Trimming these strings therefore gave spurious names for the files in which the results were saved.
- An initialization problem in the core calculations for empty synapse populations caused an array overwrite and correspondfing nasty problems. It was assuming synapses[n_synapses] would always exist, wherease it doesn't if n_synapses=0 (array indexes running from 1 to n_synapses).
PSICS 1.1.1
add to watchlist add to download basket send us an update REPORT- runs on:
- Mac OS X (-)
- file size:
- 6.3 MB
- filename:
- psics-1.1.1.jar
1 screenshot:
- main category:
- Math/Scientific
- developer:
- visit homepage
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