Java-based app for browsing large BAM and SAM alignment files. #BAM alignment file #SAM alignment file #Browse BAM file #BAM #SAM #Browse
BAMseek is an open-source, Java-based tool that enables you to open and browse SAM and BAM alignment files, irregardless of their size.
Thse typse of files are usually large and cannot be easily opened in common text viewers.
Also, BAM files are not human-readable so they require a specialized viewer to interpret the information contained within the files.
BAMseek is not a command line tool but instead it's a comfortable point-and-click GUi for browsing BAM and SAM files.
Detailed instructions on how to install and use the BAMseek utility on your Mac are available HERE.
BAMseek is a cross-platform utility capable of running on any operating system that comes with Java support (e.g. Mac OS X, Windows, Linux).
What's new in BAMseek 1.0:
- Added creating of external index to allow quick loading of large files that have already been indexed.
BAMseek 1.0
add to watchlist add to download basket send us an update REPORT- runs on:
- Mac OS X (-)
- file size:
- 475 KB
- filename:
- BAMseek2011July24.jar
2 screenshots:
- main category:
- Math/Scientific
- developer:
- visit homepage
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