What's new in RSeQC 2.3.6
Apr 18, 2013
- Fix bugs in several scripts (like bam_stat.py) that gives "OverflowError":
- File "csamtools.pyx", line 2308, in csamtools.AlignedRead.tags.__get__ (lib/pysam/csamtools.c:21058)
- OverflowError: unsigned byte integer is less than minimum
New in RSeQC 2.3.5 (Feb 22, 2013)
- Fix problems with installing bx-python
- Fix mislabeled figure legends in read duplication plot.
New in RSeQC 2.3.4 (Jan 4, 2013)
New in RSeQC 2.3.3 (Aug 31, 2012)
- No improvements. Just fix several small bugs.
New in RSeQC 2.3.2 (Aug 20, 2012)
- New module (split_bam.py) to estimate amount of ribosome RNA reads.
- New module (read_hexamer.py) to estimate hexamer frequency.
New in RSeQC 2.3.1 (Jul 28, 2012)
- Add normalization option to bam2wig.py. With this option, user can normalize different sequencing depth into the same scale when converting BAM into wiggle format.
- Add another script. geneBody_coverage2.py. This script uses BigWig instead of BAM as input, and requires much less memory (~ 200M)