GWASpi Changelog

What's new in GWASpi 2.0.2

Jun 13, 2013
  • Added GWASpi version number to matrices it creates
  • Added GWASpi databases import for some older formats
  • Bugfix in Sample Info scanning for HapMap files
  • Bugfix in Matrix Merging: added genotype encoding field
  • Bugfix in Matrix Merging: Warning in merging all samples and markers has been addressed

New in GWASpi 2.0.1 (Jun 13, 2013)

  • Added new Matrix Merge modality: merge all Markers and Samples
  • Derby Database update

New in GWASpi 2.0 (Jun 13, 2013)

  • Version as published in Bioinformatics Applications Notes:
  • http://bioinformatics.oxfordjournals.org/content/early/2011/0516bioinformatics.btr301.abstract
  • Expanded sample ID, mother ID, father ID fields from 32 to 64 characters
  • Added Strand Flipping feature
  • Bugfix in Matrix Translation feature

New in GWASpi 1.9.9 (Jun 13, 2013)

  • Bugfix in PLINK Binary import (ocurring in PLINK binary files containing an even number of samples)
  • Added PLINK Binary export (*experimental*)
  • Added Eigensoft_Eigenstrat export (*experimental*)
  • Added Version check at startup

New in GWASpi 1.9.8 (Jun 13, 2013)

  • Added PLINK Binary import
  • Added Sequenom import (*experimental*)
  • Added Sample Heterozygosity QA (not backward compatible!)
  • Added Sample Heterozygosity QA filter (not backward compatible!)
  • Added Sample Heterozygosity QA plot (not backward compatible!)
  • Optimized MACH format export
  • Cleanup of constants and I/O methods