An Java based effect prediction tool for genomic data like SNP, MNP and InDels that can be used as a web based app or as a command line one. #Variant prediction #Effect prediction #Genome variant #Prediction #Genome #Predict
snpEff is a small, fast, reliable variant effect predictor (SNP, MNP and InDels) for genomic data.
snpEff is integrated with Galaxy so it can be used either as a command line or as a web application.
A variant can be either a SNP (single-nucleotide polymorphism), an InDel (insertion or deletion) or a MNP (multiple-nucleotide polymorphism).
System requirements
What's new in snpEff 4.1k:
- This version implements the new VCF annotation standard 'ANN' field.
snpEff 4.1k
add to watchlist add to download basket send us an update REPORT- runs on:
- Mac OS X (-)
- file size:
- 46.9 MB
1 screenshot:
- main category:
- Math/Scientific
- developer:
- visit homepage
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