USeq 8.8.4

Open source and free suite of tools that makes it possible to analyze a wide array of sequencing data formats on a variety of operating systems
USeq is a handy suite of applications designed to help you analyze signature sequencing for various platforms.

Moreover, USeq is a cross-platform set of utilities, with an emphasis on mRNA-Seq and ChIP-Seq.

last updated on:
October 16th, 2014, 11:42 GMT
file size:
15.9 MB
developed by:
David Nix
license type:
operating system(s):
Mac OS X
binary format:
Universal Binary
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4 Screenshots
USeq - In this window you can access the GUI Wrapper.USeq - Some apps can be accessed this way.USeqUSeq
What's New in This Release:
  • MergeSams:
  • Created a new app to merge sam and bam files. Creates a stripped header from the files if one isn't provided. This won't play nicely with downstream GATK or Picard apps. Have yet to find at good app for doing this, SamTools and Picard's are riddled with error/ validation headaches.
  • DefinedRegionDifferentialSeq:
  • Added catch for alignments that are run off the end of the last reported base in a chromosome
read full changelog

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