A streamlined and feature-rich GUI-based application designed to analyze several proteins and nucleic acid structures simultaneously. #Protein analysis #Protein analyzer #View protein #Analysis #Protein #Structure
Swiss-PdbViewer is a free and cross-platform scientific software application for analyzing multiple proteins concurrently. You will be able to view and analyze protein and nucleic acid structures from a friendly user-interface.
In order to compare the active sites of the proteins, they can be superimposed. Moreover, you can easily calculate amino acid mutations, H-bonds angles and distances between atoms.
Using Swiss-PdbViewer, you can also connect to the Swiss-Model, which is an automated homology modeling server. Because it is possible to thread a protein primary sequence onto a 3D template, the amount of work is greatly reduced.
You can immediately check how well the threaded protein will be accepted by the reference structure before submitting a request.
Another important feature is the ability to read electron density maps and to build into the density. Residues can also be mutated. Swiss-PdbViewer can even produce ray-traced quality images by generating POV-Ray scenes from the current view.
Detailed instructions on how to install and use the Swiss-PdbViewer utility on your Mac are available developer's website.
What's new in Swiss-PdbViewer 4.1.0:
- The major change compared to 4.04 is the abandon of the default non openGL rendering mode which was causing various color issues on recent Apple hardware.
- New tool: Possibility to detect hydrophobic patches, see tutorial
- New tool: Detection of grooves (open cavities)
- New tool: Detection of contact surfaces, see tutorial
Swiss-PdbViewer 4.1.0
add to watchlist add to download basket send us an update REPORT- runs on:
- Mac OS X (PPC & Intel)
- file size:
- 13.2 MB
- filename:
- SPDBV_4.1.0_OSX.zip
- main category:
- Math/Scientific
- developer:
- visit homepage
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