RuleBender iconRuleBender 2.0.382

Cross-platform tool for biological rule-based modeling, simulation, and visualization
First of all, modern biological experiments generate great amounts of data describing intracellular dynamics.

The rule-based languages for describing intracellular biochemistry allow for the construction and simulation of detailed models with unprecedented scope and precision.

We can use rule-based Models to suggest new hypotheses and new ideas for future experimentation. Rule-based models can be difficult to understand and time consuming to debug.

The RuleBender application is a free utility that allows you to construct, debug, simulate and analyze rule-based biological models in the BioNetGen language.

Detailed instructions on how to use the RuleBender utility on your Mac are available HERE.

RuleBender is cross-platform and it works on Mac OS X, Windows and Linux. Binaries for the Windows and Linux platforms are available on the project's homepage.

Main features:

  • Model Construction and Simulation
  • Model Visualization: Interactive Contact Map
  • Model Visualization: Interactive Influence Graph
  • Results Analysis
  • Species Graph

last updated on:
September 24th, 2013, 21:37 GMT
file size:
100.6 MB
price:
FREE!
developed by:
Adam M. Smith
license type:
Eclipse Public License
operating system(s):
Mac OS X 10.5 or later
binary format:
Intel only
category:
Home \ Math/Scientific

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What's New in version 2.0.320
  • BioNetGen 2.2.4
  • NFSim 1.11
  • Persisted Contact Map layouts
  • Cleaner console management
read full changelog

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