Metingear iconMetingear 0.9.1 Beta

A streamlined open-source scientific application for all major platforms designed to help you create and curate genome-scale metabolic networks
Metingear is a free and cross-platform software solution that enables you to produce and curate metabolic networks with chemical structure on a genomic scale.

Metingear was developed because the process of creating a high-quality genome-scale metabolite reconstruction is not an easy task and might take endless hours of manual work.

Thus, Metingear aims to provide a better and more efficient method for annotated reconstructions of metabolic networks. No need for manual annotation.

Furthermore, you will be able to import existing reconstructions from Microsoft Excel,  KEGG Markup Language (KGML) and Systems Biology Markup Language (SBML).

Metingear also offers the ability to include protein and nucleotide sequence information from FASTA format files as well as European Nucleotide Archive (ENA).

Metingear is cross-platform and it works on Mac OS X, Windows and Linux. Binaries for the Windows and Linux platforms are available on the project's homepage.

Main features:

  • Import reconstructions from SBML, KGML and Excel
  • Include nucleotide and protein sequence information from ENA and FASTA
  • Easily resolution of cross-references
  • Import / export RDF annotations from SBML
  • Import structure diagram from CML, MDL V2000/V3000, InCh and SMILES
  • Export chemical structures to SDF or as InChI annotations in SBML
  • Using the name of a metabolite, search multiple resources
  • Automatically fetch a structure using cross-references

last updated on:
October 15th, 2013, 9:44 GMT
file size:
34.8 MB
price:
FREE!
developed by:
John May
license type:
Freeware
operating system(s):
Mac OS X
binary format:
Universal Binary
category:
Home \ Math/Scientific

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4 Screenshots
Metingear - From the left pane, you can access the metabolic reconstructions, active reconstructions, tasks and collections.Metingear - The Resources tab of the preferences enables you to manage the ChEBI, KEGG, BioCyc and other resources.Metingear - You can also make several modifications to the rendering from the preferences.Metingear

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