Gitools iconGitools 2.2.1

Allows you to view and analyze genomic data
Gitools is a unique, easy to use framework for analysis and visualization of genomic data.

Data and results are represented as browsable heatmaps. Gitools allows to import data directly from IntOGen and Biomart.

Gitools is written in the Java programming language.

last updated on:
July 16th, 2014, 8:14 GMT
file size:
22.7 MB
price:
FREE!
developed by:
Biomedical Genomics Group
license type:
Freeware
operating system(s):
Mac OS X
binary format:
-
category:
Home \ Math/Scientific

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4 Screenshots
Gitools - In this window you can visualize genomic data and properties.GitoolsGitools - Some data actions can be accessed this way.Gitools
What's New in version 1.7.0
  • IGV search:
  • Integrative Genomics Viewer (IGV) is a very powerful genomic browser that provides a complementary visualization of multidimensional genomics data to that of interactive heatmaps. Often it is useful to explore this type of data with the two tools at the same time. With that idea in mind we did a first step to integrate the two types of views. Using the IGV interface for other applications to send commands, Gitools can now locate any position within the human chromosome in your opened instance of IGV. In the screenshot we have the focus on the gene CPM (with the Ensembl id ENSG00000135678). If you click the link “Locate Id in genomic viewer (IGV)” in the left details panel, Gitools will locate the gene within IGV. If you have many genes selected, then Gitools will tell IGV to show them in split screen view.
  • Display name in color labels:
read full changelog

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