Open-source application for extended pathway analysis. #Extended pathway analysis #Identify Gene Ontology #Gene Ontology identifier #Identify #Gene Ontology #GO
GO-Elite is a software tool designed to identify a minimal non-redundant set of Gene Ontology (GO) biological terms or pathways to describe a particular set of genes.
Alternate ontologies (e.g., Disease Ontology), metabolomics data and gene sets and can also be used as input.
This tool calculates over-representation statistics similar to the PC program MAPPFinder and subsequently produces filtered GO and pathway results along with corresponding gene annotations and summarized expression data.
GO-Elite version 1 is provided as a stand-alone application for the Mac and PC and as cross-platform source code in python.
This software can be run using an intuitive graphical user interface, through command-line flags or by webservice. The webservice is accessible through a website, programmatically or using the GO-Elite plugin in Cytsoscape.
Detailed instructions on how to install and use the GO-Elite utility on your Mac are available HERE.
System requirements
- 64-bit processor
What's new in GO-Elite 1.2.6 Dev:
- more flexible options for pathway coloring
- automatic heatmap visualization of overlapping results
- automatic network visualization of genes and enriched terms. See version 1.2.4 updates for addition recent major updates
GO-Elite 1.2.5 / 1.2.6 Dev
add to watchlist add to download basket send us an update REPORT- runs on:
- Mac OS X 10.6 or later (-)
- file size:
- 36 MB
- filename:
- GO-Elite_v1.2.5_OSX_64bit.dmg
- main category:
- Math/Scientific
- developer:
- visit homepage
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