Amide 1.0.5

Free tool for viewing, analyzing and registering volumetric medical imaging data sets.
AMIDE is a utility that allows you to analyze, register and view medical imaging data sets.

AMIDE is written using GTK and runs on Mac OS X, Windows and Linux.

Main features:

  • Arbitrary orientation, thickness, and time period slice viewing of a data set.
  • Multiple data sets can be loaded and viewed at once, with either linked or fused views. Each data set can be viewed from any orientation. Fusing can be done by blending or overlay.
  • Nearest Neighbor and Trilinear interpolation functions
  • Zooming
  • The following colormaps are supported: Black/White,White/Black,Red/Green/Blue Temperature, Hot Metal/Blue/Green, Spectrum, NIH/UCLA
  • Thresholding: data sets are thresholded independently. Data sets can be thresholded over the entire data set or over each slice.
  • 3-dimensional ROI's can be drawn directly on the images and statistics can be generated for these ROI's. Currently supported ROI's are ellipsoids, elliptic cylinder's, boxes, and isocontours.
  • Imports raw data files (8bit,16bit,32bit,float,etc). Also imports Acr/Nema 2.0, Analyze (SPM), DICOM 3.0, InterFile3.3, ECAT 6/7, and Gif87a/89a (using the (X)medcon/libmdc).
  • Imports most clinical DICOM files (using the DCMTK library).
  • Allows cropping and clearing regions of data sets.
  • Anisotropic filtering wizard. Current filters: Gaussian, 1D Median, and 3D Median
  • Saves studies (ROI and Data Set data) as XML data.
  • Series of slices can be viewed.
  • Fly through movies can be generated as MPEG1 files
  • True volume rendering support with the capability of rendering multiple data sets at a time. Series of renderings can be saved as MPEG1 movies. Data sets can also be rendered as stereoscopic image pairs
  • Alignment of data sets is supported using fiducial markers. This is done by placing fiducial reference points on the data sets to be aligned, and then running an alignment wizard to perform a rigid body transformation (procrustes method).
  • A profile tool is included that can calculate gaussian fits and FWHM's of the generated line profiles. Profiles can also be saved for external use.

last updated on:
January 28th, 2014, 4:48 GMT
file size:
14.8 MB
price:
FREE!
developed by:
Andy Loening
license type:
GPL 
operating system(s):
Mac OS X 10.3.9 or later
binary format:
Universal Binary
category:
Home \ Math/Scientific

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user rating 16

2.4/5
 

0/5

8 Screenshots
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What's New in This Release:
  • raw_data_import now shows correct file size if file > 2GB
  • new math functions: remove-negatives, t2*calc
  • increased bitrate of ffmpeg encoding by 5-fold
  • fixed func definition for amitk_color_table_menu_new [1]
read full changelog

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