AlleleID is a comprehensive desktop application created to address the challenges of bacterial identification, pathogen detection or taxa/species detection.
With ClustalW multiple sequence alignment at its core, AlleleID can be used to design species detection/cross species probes for microarrays or real time PCR including SYBR Green, TaqMan MGB, TaqMan probes, Molecular Beacons and real time PCR primers.
AlleleID also offers support for designing microarray experiments for detecting alternative splicing events.
Here are some key features of "AlleleID":
· Cross Species/ Taxa Specific Assays
· Species Identification Assays
· Gene Splicing/Alternative Splicing using Microarrays
· Exon Junction Primer Design
· Real Time PCR Primer Design
· TaqMan Probe Design
· SYBR Green Primer Design
· Molecular Beacon Design
· FRET probe design
· Microarray Probe Design
· NEAT Assay Design
· Database support
· Input and Output Formats
Requirements:
· Mac Power PC G5 1.6 GHz.
· 256 MB of available RAM
· 500 MB of available hard disk
· Screen Resolution 800 X 600
Limitations:
· Some functions are not available on this demo version.
What's New in This Release: [ read full changelog ]
· The upgrade includes fixes to reported problems.