FAIF is a C++ librariy for bioinformatics and artificial intelligence. Portable C++ library defines basic abstractions (like state, space, attribute etc.), DNA primitives (Nucleotide, Chain, EnergyNucleo, SecStruct, FoldedChain, FoldedPair, Codon, CodonAminoTable ), some of known AI alghoritms ( Naive Bayesian Classifier, Validator ), Timeseries primitives (TimeSeriesDigit, TimeSeriesReal, linear resampling) and others (Command pattern, Random generators).
The main goal is bioinformatics applications, where simple and portable library is needed.
NOTE: FAIF is licensed and distributed under the terms of the GNU Library or Lesser General Public License (LGPL).
What's New in This Release: [ read full changelog ]
· compilation with boost 1.37
· AUTO_TEST_CASE used for testing library components
· ActiveObject: command holder template